Single Cell Analysis Software Suite

Analysis Software

Gold Medicals presents a comprehensive suite of tools designed to transform single cell data into actionable biological insights. Our software platform offers an intuitive visual canvas for exploring complex datasets, empowering researchers and clinicians alike—regardless of bioinformatics expertise—to accelerate discovery.

Cell Ranger Analysis Pipelines

Streamline your workflow with Cell Ranger, a free set of analysis pipelines engineered specifically for processing Chromium Single Cell data.

• Process raw sequencing reads to generate high-quality cell-feature matrices
• Perform quality control (QC) and identify cell barcodes accurately
• Quantify gene expression at the single-cell level with precision
• Enable downstream analyses including clustering and secondary interpretation

Cloud Analysis

Accelerate time-to-results by accessing Cell Ranger directly through a web-based interface.

• Run analysis workflows securely via your browser
• Available in the United States and Canada
• Eliminate local computational constraints with scalable cloud infrastructure

Loupe Browser

A powerful desktop application for Windows and MacOS that enables interactive, deep-dive exploration of single cell datasets.

• Visualize data without requiring coding or command-line operations
• Seamlessly integrate Seurat analysis results using LoupeR—a dedicated R package that exports Seurat objects into Loupe-compatible files
• Perform multi-sample comparisons to identify differentially expressed genes in treatment vs. control experiments
• Rapidly visualize expression patterns of key genes across cell populations
• Generate interactive heatmaps and violin plots for clear interpretation of differential expression results
• Easily annotate cell types based on marker gene profiles and visual clustering

Clinical and Research Applications

Ideal for use in genomics research, immunology, oncology, and precision medicine studies. Supports advanced analysis workflows in academic institutions, biopharmaceutical R&D, and clinical laboratories focused on cellular heterogeneity.

Compliance and Accessibility

• Compatible with Windows 10/11 and macOS 12 or later
• Designed for secure data handling in regulated research environments
• Cloud Analysis deployment adheres to regional data residency requirements where available

Gold Medicals delivers an end-to-end solution that bridges advanced single cell analysis with real-world clinical and research applications—making complex data accessible, interpretable, and impactful.